2019-09-27

The article “K. M. Helal, J. N. Taylor, H. Cahyadi, A. Okajima, K. Tabata, Y. Itoh, H. Tanaka, K. Fujita, Y. Harada, T. Komatsuzaki, Raman spectroscopic histology using machine learning for nonalcoholic fatty liver disease, FEBS Lett. 593(18) (2019) 2535-2544”, has been selected as editor’s choice . The cover art of this volume of FEBS Letters is taken from this article.

2019-09-20

The office of WPI-ICReDD updated Prof. Komatsuzaki’s researcher profile with the video explaining that nature does not know any boundaries in science.

2019-07-30

ICReDD posted a promotional video.

2018-10-08

Institute for Chemical Reaction Design and Discovery, Hokkaido University was chosen as the World Premier International Research Center (WPI) .

2018-10-01

The academic-industrial alliance by Hokkaido University – Kyoto University – Hitachi.Ltd based JST/CREST application which involves collaborative research between Hokkaido University and Hitachi.Ltd which was led by Prof. Komatsuzaki was chosen as one of the research projects starting from 2018. [Steering Toward Spatio-Temporal Computing Architecture Driven by Learning/Math-Scientific Models (Research Director: Prof. Masato Motomura) ]

2018-07-19

“Press release” of Dr. Sosuke Ito’s paper in Physical Review Letters from Hokkaido University

2017-09-28

Prof. Tamiki Komatsuzaki was chosen as one of the Program Committee of DSAA2017 – The 4th IEEE International Conference on Data Science and Advanced Analytics”Special Session on Advanced Informatic Measurement using Statistics, Machine Learning and Pattern Recognition (AimSMLPR) “.

2016-07-12

“Press release” of Dr. Satoru Tsugawa’s paper in Developmental Cell from Hokkaido University

2016-01-08

“Press release” of Dr. Chun-Biu Li’s paper in Nature Communications from Hokkaido University

2015-10-26

Mr. Yutaka Nagahata received Best Poster Award at The 9th Annual Meeting of Japan Society for Molecular Science.

2015-06-04

Mr. Yutaka Nagahata received Best Poster Prize at 31st Symposium on Chemical Kinetics and Dynamics.

2015-03-18

“Press release” of Dr. J. Nicholas Taylor’s paper in Scientific Reports from Hokkaido University

2014-12-17

Mr. Yutaka Nagahata received Poster Award at The 15th Ries-Hokudai International Symposium 響[hibiki].

2014-10-31

Prof. Tamiki Komatsuzaki was commended for his outstanding work as a reviewer of JSPS Committee on Grants-in-Aid for Scientific Research to screen written applications from a specialized viewpoint.

2014-03-11

Mr. Yutaka Nagahata received Presentation Award at the Meeting of Hokkaido Branch of the Biophysical Society of Japan.

2013-11-05

Mr. Yutaka Nagahata’s Figure in “Y. Nagahata, et al. Phys. Rev. E 88, 042923 (2013)” was selected as Physical Review E Kaleidoscope Images: October 2013

2013-01-30

Dr. Shinnosuke Kawai got incentive award from CSJ Hokkaido branch

2012-09-03

Yutaka Nagahata received Best Question award at Summer School for the Organization of Young Biophysicists

2012-06-01

Dr. Shinnosuke Kawai’s Bulletin of the Chemical Society of Japan article was turned out to give him the BCSJ award

2012-04-12

Dr. Shinnosuke Kawai received CSJ Presentation award 2012 at Annual Conference of Chemical Society of Japan

2021.05.17

Invited Paper by Udoy S. Basak, Sulimon Sattari, Md. Motaleb Hossain, Kazuki Horikawa, Tamiki Komatsuzaki, ”Transfer entropy dependent on distance among agents in quantifying leader-follower relationships” was published in Biophysics and Physicobiology

2020.12.14

Udoy S. Basak, Sulimon Sattari, Kazuki Horikawa, Tamiki Komatsuzaki “Erratum: Inferring domain of interactions among particles from ensemble of trajectories” was published

2020.07.09

Udoy S. Basak, Sulimon Sattari, Kazuki Horikawa, and Tamiki Komatsuzaki, “Inferring domain of interactions among particles from ensemble of trajectories” was published

2020.03.24

Tamiki Komatsuzaki, Haruki Nakamura, Jeremy Tame, Saeko Yanaka, Takeharu Nagai & Kuniaki Nagayama , “Editorial for the Special Issue of Biophysical Reviews focused on the Biophysical Society of Japan with select scientific content from the 57th BSJ annual meeting, Miyazaki, Japan” was published

2020.01.22

Hiroshi Teramoto, Asahi Tsuchida, Kenji Kondo, Shyuichi Izumiya, Mikito Toda, and Tamiki Komatsuzaki “Application of Singularity Theory to Bifurcation of Band Structures in Crystals” was accepted.

2019.10.30

Koji Tabata, Atsuyoshi Nakamura, Junya Honda, Tamiki Komatsuzaki, “A bad arm existence checking problem: How to utilize asymmetric problem structure?” was published

2019.09.27

The article “K. M. Helal, J. N. Taylor, H. Cahyadi, A. Okajima, K. Tabata, Y. Itoh, H. Tanaka, K. Fujita, Y. Harada, T. Komatsuzaki, Raman spectroscopic histology using machine learning for nonalcoholic fatty liver disease, FEBS Lett. 593(18) (2019) 2535-2544”, has been selected as editor’s choice . The cover art of this volume of FEBS Letters is taken from this article.

2018.11.15

Tamiki Komatsuzaki Minorities and Small Numbers from Molecules to Organisms in Biology-Toward a New Understanding of Biological Phenomena: Chapter 5 “The Personality of Small Numbers: Do Molecules Have Personality?” edited by Takeharu Nagai and Yuichi Togashi (Springer) was published.

2018.07.18

Sosuke Ito, “Stochastic thermodynamic interpretation of information geometry” was published

2018.05.01

Tamiki Komatsuzaki, “化学反応理論の普遍性：GRRMに期するもの”, IQCE NEWS was published.

2018.01.24

James Nicholas Taylor, Menahem Pirchi, Gilad Haran, Tamiki Komatsuzaki, “Deciphering hierarchical features in the energy landscape of adenylate kinase folding/unfolding”, The Journal of Chemical Physics was published.

2018.01.22

James Nicholas Taylor, Menahem Pirchi, Gilad Haran, and Tamiki Komatsuzaki: “Deciphering hierarchical features in the energy landscape of Adenylate Kinase folding/unfolding”, J. Chem. Phys. Special Issue Single Molecule Biology (invited) was selected as “Editor’s Pick”

2017.12.12

Yuji Tamiy, Rikiya Watanabe, Hiroyuki Noji, Chun-Biu Li, Tamiki Komatsuzaki, “Effects of non-equilibrium angle fluctuation on F1-ATPase kinetics induced by temperature increase”, Physical Chemistry Chemical Physics was published.

2017.11.20

Nathan Hervieux, Satoru Tsugawa, Antoine Fruleux, Mathilde Dumond, Anne-Lise Routier-Kierzkowska, Tamiki Komatsuzaki, Arezki Boudaoud, John C. Larkin, Richard S. Smith, Chun-Biu Li, Olivier Hamant, “Mechanical Shielding of Rapidly Growing Cells Buffers Growth Heterogeneity and Contributes to Organ Shape Reproducibility”, Current Biology was published.

2017.11.20

Yuichi Togashi, Soya Shinkai, Tamiki Komatsuzaki, “特集：少数性生物学ってなんだ？: 「少数と個性―分子の数と生命らしさ」”, Experimental Medicine was published.

2017.09.25

Tamiki Komatsuzaki, “Advances in Chemical Physics: “Single Molecule Data Analysis: An Introduction”” was published

2017.09.05

Sosuke Ito and Takahiro Sagawa, “ネットワーク上の情報熱力学とその生体情報処理への応用”, The Nihon Butsuri Gakkaishi was published

2017.07.24

Jonas Alfermann, Xun Sun, Florian Mayerthaler, Thomas E. Morrell, Eva Dehling, Gerrit Volkmann, Tamiki Komatsuzaki, Haw Yang, and Henning D. Mootz, “FRET monitoring of a nonribosomal peptide synthetase”, Nature Chemical Biology was published

2017.07.14

Hiroshi Teramoto, Kenji Kondo, Shyuichi Izumiya, Mikito Toda, and Tamiki Komatsuzaki, “Classification of Hamiltonians in neighborhoods of band crossings in terms of the theory of singularities”, Journal of Mathematical Physics was published

2017.03.25

Tamiki Komatsuzaki, “少数性生物学：第5章「少数の個性～分子にも個性？～」” was published

2019.09.24

Prof. Komatsuzaki is going to hold the workshop: 【Workshop】International & Interdisciplinary Workshop on Chemical Reaction Dynamics—Mathematics Informatics, and Physics Meet Chemistry, Oct. 08(tue), 2019, ICReDD Salon (02-106, CRIS building), Hokkaido University

2019.08.05

Prof. Komatsuzaki held the workshop: ラマン情報計測会議, (8.3-8.5 ,2019), ニセコ町民センター, 北海道ニセコ町

2019.06.16

Prof. Komatsuzaki held the workshop: The Complexity of Dynamics and Kinetics from Single Molecules to Cells, (6.16-6.20 ,2019), Telluride Intermediate School, Telluride, CO. USA

2019.03.26

Dr. Teramoto held the workshop: AIMaPワークショップ「⾮ノイマン型計算、理論と応⽤」, (3.26 ,2019), 北海道大学電子科学研究所, 北海道札幌市

2019.03.15

Prof. Komatsuzaki held the workshop: 北大・日立新概念コンピューティングコンテスト 2018 表彰式, (3.15 ,2019), 福岡大学七隈キャンパス, 福岡県福岡市

2019.03.03

Prof. Komatsuzaki held the workshop: バイオ情報計測技術研究会, (3.1-3.3 ,2019), グリーンピア大沼, 北海道茅部郡森町

2019.02.25

Prof. Komatsuzaki held the workshop: シンギュラリティ生物学デザイン思考研究会, (2.23-2.25 ,2019), THE HAMANAKO, 静岡県浜松市

2017.12.01

Dr. Teramoto held the workshop: The 18th RIES-HOKUDAI International Symposium 極 [kyoku] joint with the 2nd International Symposium of Dynamic Alliance for Open Innovation Bridging Human, Environment and Materials, (11.30-12.1 ,2017), CHÂTERAISÉ Gateaux Kingdom SAPPORO, Sapporo, Hokkaido

2017.09.08

Prof. Komatsuzaki held the workshop: Deciphering complex energy landscape and kinetic network from single molecules to cells: a new challenge to make theories meet experiments, (9.3-9.8 ,2017), Hotel Mercure Dijon, Dijon, France

2017.08.20

Prof. Komatsuzaki held the workshop: ラマン情報計測会議, (8.18-8.20 ,2017), ニセコ町民センター, 北海道ニセコ町

2017.06.24

Prof. Komatsuzaki held the workshop: The Complexity of Dynamics and Kinetics from Single Molecules to Cells, (6.20-6.24 ,2017), Telluride Intermediate School, Telluride, CO. USA

2015.11.25

Prof. Komatsuzaki held the workshop: Theory of Gas Phase Scattering and Reactivity for Astrophysics 11.23-12.8 2015

2015.08.07

Dr. Teramoto held the workshop: Geometry of Chemical Reaction Dynamics in Gas and Condensed Phases 7.27-8.7 2015

2015.07.15

Prof. Komatsuzaki is going to hold the workshop: Deciphering molecular complexity from protein functions to cellular network in December 15-16, 2015

2015.06.22

The workshop proposed by Dr. Teramoto was accepted by Ministry of Education (CSFI develop and practice interdisciplinary education program integrate insurance and financial into the mathematical principle).

2015.06.14

Prof. Komatsuzaki held the collaborative work shop “The Complexity of Dynamics and Kinetics from Single Molecules to Cells”

2015.06.03

Prof. Komatsuzaki held the workshop: the 31st Symposium on Chemical Kinetics and Dynamics

2015.03.06

We organized a Workshop on dynamical systems and computation 2015

2014.12.12

We organized The 2nd International Symposium on Ambitious Leader’s Program for Fostering Future Leaders to Open New Frontiers in Materials Science “Ambition Across the Disciplines” at Akira Suzuki Hall, Frontier Research in Applied Sciences Building, Hokkaido University, Sapporo, Sapporo, Hokkaido

2014.08.28

We organized a Workshop ”What kinds of dynamical feature can we extract from data?” at Niseko town center, Niseko, Hokkaido

2019.06.04

Hiroshi Teramoto presented his research.

2019.05.29

Tamiki Komatsuzaki presented their research.

2019.03.26

Hiroshi Teramoto presented his research.

2018.07.02

Tamiki komatsuzaki presented his research.

2018.05.31

Hiroshi Teramoto presented his research.

2018.05.30

Sosuke Ito presented his research.

2018.05.23

Tamiki komatsuzaki presented his research.

2018.04.20

Tamiki komatsuzaki presented his research.

2018.04.13

Sulimon Sattari presented their research.

2018.04.13

J. Nicholas Taylor presented his research.

2017.12.22

Hiroshi Teramoto presented his research.

2017.12.18

Koji Tabata presented his research.

2017.12.07

Tamiki komatsuzaki presented his research.

2017.11.13

Tamiki komatsuzaki presented his research.

2017.11.12

Sosuke Ito presented his research.

2017.11.09

Koji Tabata presented their research.

2017.10.06

Hiroko Yamada presented her research.

2017.10.06

Sosuke Ito presented his research.

2017.09.29

Sosuke Ito presented his research.

2017.09.24

Hiroshi Teramoto presented their research.

2022.12.02

Jean-Emmanuel Clement, Zannatul Ferdous, Koji Tabata, Shinya Tanaka, Jian Ping Gong, Katsumasa Fujita, Tamiki Komatsuzaki: “Establishment of a novel platform of Raman microscope for diagnosis of hydrogel-generated cancer stem cells”, WPI joint symposium for interdisciplinary life sciences, The 45th Annual Meeting of the Molecular Biology Society of Japan(11.30-12.2 ,2022), Makuhari Messe, Chiba 12, 2 (Oral)

2022.10.31

Tamiki Komatsuzaki: “Acceleration of Single Cell Raman Imaging to Guarantee the Accuracy of Diagnosis by Reinforcement Learning”, Data Modeling and Computation: Capturing Biomolecular Processes(10.31-11.4 ,2022), CECAM-HQ-EPFL, Lausanne, Switzerland 10, 31 (Invited, Oral)

2022.10.04

Tamiki Komatsuzaki: “On-the-fly Raman microscopy with Guaranteeing Accuracy using Reinforcement Learning I: Theory”, FACSS SciX 2022(10.2-10.7 ,2022), Northern Kentucky Convention Center, Cincinnati, Kentucky, USA 10, 4 (Invited, Oral)

2022.09.20

Tamiki Komatsuzaki: “Single Molecule Biophysics: What do Single Molecules Experience its Energy Landscape?”, Computational Biophysics of Atomic Force Microscopy(9.19-9.21 ,2022), Kanazawa University, Kanazawa, Japan 9, 20 (Invited, Oral)

2022.08.31

Jean-Emmanuel Clement, Zannatul Ferdous, James Nicholas Taylor, Koji Tabata, Yoshinori Harada, Masami Tsuda, Shinya Tanaka, Jian Ping Gong, Katsumasa Fujita, Tamiki Komatsuzaki: “Gaussian Weighted Background Correction for Raman images”, 19th European Conference on the Spectroscopy of Biological Molecules(8.29-9.1 ,2022), University of Reims Champagne-Ardenne, Reims, France 8, 31 (Oral)

2022.06.03

Yuta Mizuno, Mikoto Takigawa, Saki Miyashita, Yutaka Nagahata, Hiroshi Teramoto, Tamiki Komatsuzaki: “An algorithm for computing phase space structures in chemical reaction dynamics using Voronoi tessellation”, 37th Symposium on Chemical Kinetics and Dynamics(6.1-6.3 ,2022), Online, Sendai, Japan 6, 3 (Oral)

2022.06.01

Ryoichi Tanaka, Yuta Mizuno, Takuro Tsutsumi, Mikhail Tsitsvero, Mikito Toda, Tetsuya Taketsugu, Tamiki Komatsuzaki: “A Theoretical Study of Organic Reaction Dynamics in a Low Dimensional Space Reduced by Principal Component Analysis”, 37th Symposium on Chemical Kinetics and Dynamics(6.1-6.3 ,2022), Online, Sendai, Japan 6, 1 (Poster)

2022.04.05

Tamiki Komatsuzaki, Koji Tabata, Hiroyuki Kawagoe, James Nicholas Taylor, Kentaro Mochizuki, Toshiki Kubo, Jean-Emmanuel Clement, Yasuaki Kumamoto, Yoshinori Harada, Atsuyoshi Nakamura, Katsumasa Fujita: “On-the-fly Raman image microscopy by reinforcement machine learning”, SPIE Photonics Europe 2022(4.3-4.7 ,2022), Palais de la Musique et des Congrès, Strasbourg, France 4, 5 (Invited, Oral)

2022.03.07

Tamiki Komatsuzaki: “Acceleration of Designing Chemical Reactions by Contextual Multi-armed Bandit Algorithm”, ICReDD/Hokkaido University Five Attached Institutes Joint Symposium(3.7-3.7 ,2022), Online, Sapporo, Japan 3.7, 3.7 (Invited, Oral)

2021.12.22

Yuta Mizuno: “Chemical Reaction Pathway Analysis by Ising Computing”, 2021 RIES-CEFMS on-line symposium (12.21-12.22 ,2021), Center for Emergent Functional Matter Science, National Yang Ming Chiao Tung University 12, 22 (Invited, Oral)

2021.12.06

Zannatul Ferdous, Jean-Emmanuel Clement, James Nicholas Taylor, Koji Tabata, Yoshinori Harada, Masami Tsuda, Shinya Tanaka, Jian Ping Gong, Katsumasa Fujita, Tamiki Komatsuzaki: ” Gaussian Weighted Background Correction Scheme for Hyperspectral Raman Data Preprocessing”, The 22nd RIES-HOKUDAI International Symposium(12.6-12.7 ,2021), Online 12, 6 (Poster)

2021.09.30

Tamiki Komatsuzaki , Koji Tabata, Hiroyuki Kawagoe, James Nicholas Taylor , Kentaro Mochizuki , Jean-Emmanuel Clement , Yasuaki Kumamoto , Atsuyoshi Nakamura , Yoshinori Harada , Katsumasa Fujita: “On-the-fly Raman image microscopy by reinforcement machine learning”, FACSS SciX 2021(9.26-10.1 ,2021), Rhode Island Convention Center, Providence, RI, USA 9, 30 (Invited, Oral)

2021.05.11

Koji Tabata, Atsuyoshi Nakamura, Tamiki Komatsuzaki: “Classification Bandits: Classification Using Expected Rewards as Imperfect Discriminators”, PAKDD2021 Workshop on Machine Learning for MEasurement Informatics(5.11-5.11 ,2021), Online, Osaka 5, 11 (Oral)

2021.02.22

NAGAHATA Yutaka, TAKETSUGU Tetsuya, MAEDA Satoshi, KOMATSUZAKI Tamiki: “The hierarchy of observable reaction networks associated with observation time-intervals”, ICReDD 3rd International Symposium(2.22-2.24 ,2021), Online, Sapporo, Japan 2, 22 (Poster)

2021.02.22

Zannatul Ferdous, Masumi Tsuda, Jean-Emmanuel Clément, Koji Tabata, Jian Ping Gong, Shinya Tanaka, Tamiki Komatsuzaki: “Detection of Cancer Stem Cells in Sarcoma Model Cells Using Morphological Features for Developing New Diagnostics Tools”, ICReDD 3rd International Symposium(2.22-2.24 ,2021), Online, Sapporo, Japan 2, 22 (Poster)

2020.12.10

Sulimon Sattari, Udoy Basak, Motaleb Md. Hossain, Kazuki Horikawa, Tamiki Komatsuzaki: “Vector analysis of amoeba motion with respect to the propagation of chemoattractant cyclic-AMP”, The 21st RIES-HOKUDAI International Symposium(12.10-12.11 ,2020), Online, Sapporo 12, 10 (Poster)

2020.12.10

Md. Motaleb Hossain, Sulimon Sattari, Udoy Sankar Basak, Kazuki Horikawa, Tamiki Komatsuzaki: “Vector analysis of amoeba motion response to a cyclic-AMP wave”, The 21st RIES-HOKUDAI International Symposium(12.10-12.11 ,2020), Online, Sapporo 12, 10 (Poster)

2020.12.10

Jean-Emmanuel Clément, Mochizuki Kentaro, Katsumasa Fujita, Tamiki Komatsuzaki: “Raman Imaging for Exploring Cancer Metabolism”, The 21st RIES-HOKUDAI International Symposium(12.10-12.11 ,2020), Online, Sapporo 12, 10 (Poster)

2020.12.10

Zannatul Ferdous, Masumi Tsuda, Jean-Emmanuel Clément, Koji Tabata, Yusuke Ishida, Jun Suzuka, Jian Ping Gong, Shinya Tanaka, Tamiki Komatsuzaki: “Analysis of Cancer Stem Cells in Sarcoma Model Cells by Deep Neural Network”, The 21st RIES-HOKUDAI International Symposium(12.10-12.11 ,2020), Online, Sapporo 12, 10 (Poster)

2020.12.10

Udoy S. Basak, Sulimon Sattari, Motaleb M. Hossain, Kazuki Horikawa, Tamiki Komatsuzaki: “Inferring domain of Interaction among Dictyostelium discoideum colony from the ensemble of Trajectories of cells”, The 21st RIES-HOKUDAI International Symposium(12.10-12.11 ,2020), Online, Sapporo 12, 10 (Poster)

2022.04.01

Yoshihiro Matsunaga (Postdoctoral Fellow), Ryosuke Takami (M1), Shunta Nonaga (B4), and Kazuya Noto (B4) joined our lab.

2021.10.01

Joshua ARRENSON (Postdoctoral Fellow) joined our lab.

2021.09.28

Mohammad ALI joined our lab.

2019.10.01

Mikhail TSITSVERO（WPI-ICReDD Specially Appointed Assistant Professor) and Yutaka Nagahata（Postdoctoral Fellow）joined our lab.

2019.07.12

Dr. Md Motaleb Hossain(foreign cooperation researcher) joined our laboratory

2019.06.14

Prof. Yoshinori Harada at Kyoto Prefectural University of Medicine visited our laboratory.

2019.05.01

Mr Abdul Halim BHUIYAN was appointed as research fellow.

2019.04.01

Dr Yuta Mizuno was appointed as WPI postdoctoral research fellow.

2019.03.31

Mr. AURELIEN PELISSIER completed his term of office and will start his master’s course at ETH Zurich.

2019.03.25

Mr. Mikoto Takigawa graduated from the Department of Chemistry, Faculty of Science.

2019.03.01

Dr. Asahi Tsuchida was promoted to Assistant Professor, Warsaw University of Technology.

2019.01.22

Dr. Yuta Mizuno (JSPS Research Fellow) and Ms. Saki Miyashita (undergraduate student) joined our laboratory

2018.12.01

Dr. Sosuke Ito was promoted to Lecturer, Universal Biology Institute, Graduate School of Science, The University of Tokyo.

2018.11.14

Dr Jean-Emmanuel CLEMENT was appointed as JSPS Postdoctoral Fellow and Ms Matsue KOIDA was appointed as secretary.

2018.10.01

Mr AURELIEN PELISSIER was appointed as research fellow.

2018.04.01

Mr. Mikoto Takigawa joined our laboratory

2018.03.25

Ms. Hiroko Yamada graduated from the Department of Chemistry, Faculty of Science.

2018.01.01

Dr. Koji Tabata was promoted to a specially appointed assistant professor.

2017.10.25

Dr. Yutaro Kabata at Kobe University visited our laboratory.

2017.10.01

Mr. Udoy Sankar Basak joined our laboratory.